CDS

Accession Number TCMCG007C57173
gbkey CDS
Protein Id XP_009116293.1
Location join(35532065..35532663,35532759..35532930,35533044..35533243,35533320..35533478,35534986..35535334)
Gene LOC103841502
GeneID 103841502
Organism Brassica rapa

Protein

Length 492aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009118045.3
Definition protein ESKIMO 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description function) domain. TBL gene family has 46 members, two of which (TBR AT5G06700 and TBL3 AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff Wolf Scheible, 2010, personal communication)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000271        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008374        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010383        [VIEW IN EMBL-EBI]
GO:0010410        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016051        [VIEW IN EMBL-EBI]
GO:0016407        [VIEW IN EMBL-EBI]
GO:0016413        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016746        [VIEW IN EMBL-EBI]
GO:0016747        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0033692        [VIEW IN EMBL-EBI]
GO:0034637        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042546        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044036        [VIEW IN EMBL-EBI]
GO:0044038        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045491        [VIEW IN EMBL-EBI]
GO:0045492        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050826        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070589        [VIEW IN EMBL-EBI]
GO:0070592        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990538        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAACCCTGGAGAAGAAAATTTCCATTGTTCGAAACAGGAATCACAATGAAACAGAGAAAGAACAGTAACCTCTCTATCTTCGCCGTCGTCTTCTCTGTCTTCCTCTTCGGCATCTTCTTGTACAACGAAGACGTCAAGTCCATCGCCGATTTTCCTTTCTCCAGCTCAAAACCTAGCAACGTCCAAGAGAGCCAAGAGGAGGCTAAACCGACCACGGAGATTACGTCACTACCAATTCAAGAACCGGTCAAGAACTCAGACCCAGCTCAAGAACCGGTCAAAAAACCAGAGCCGGATCAAGATTCAGTGAGAGAAACAGAGCCAGTTCAAGAAGAGGTGTCGAAAGCAGAGGAAGGGAAGAAGATTGAGCTGTTTGCTGTGACGGAGGAAGAAGACGACGGAGGTGACGTGGAGTTACCGCCGGAGGAGTGTGATTTGTTCACCGGAGAATGGGTGTTCGATAACGAGACGCATCCGTTGTATAAAGAGGATCACTGTGAGTTCTTGACGGCGCAAGTGACTTGCATGAGAAACGGAAGAAGAGATTCTTTGTATCAGAACTGGAGATGGCAGCCAAGAGACTGTTCTTTACCAAAGTTCAAAGCGAAATTGTTACTGGAGAAGCTAAGAAACAAGAGAATGATGTTCGTTGGGGATTCACTTAACCGGAATCAATGGGAATCGATGGTTTGCCTGGTTCAATCAGTGGTTCCTCCCGGTCGAAAGAGCTTGAACAAAACCGGTTCTCTCTCCGTCTTCCGAGTCGAGGATTATAATGCAACGGTGGAATTTTATTGGGCGCCATTTTTGGTGGAATCGAATTCAGATGATCCAAACATGCATAGTATACTTAACCGTATAATAATGCCCGAGTCCATAGAAAAGCATGGAGTCAACTGGAAAGGCGTTGACTTTCTTGTATTCAACACTTACATTTGGTGGATGAACACATTCGACATGAAAGTTCTACGAGGATCGTTCGATAAAGGGGACACTGAGTACGAAGAGATCCAACGGCCAGTTGCGTACCAGAGAGTGTTAAGGACATGGGGAGATTGGGTGGAACAAAATATTGACCCTCTACATACCACTGTTTTCTTCGCTAGCATGTCTCCTCTACACATCAAGAGCTTGGATTGGGAGAATCCAGATGGGATAAAGTGTGCTTTAGAGACGACGCCGATTCTCAACATGTCAATGCCCTTCAGCGTAGGAACAGACTACAGGCTGTTTTCAGTAGCAGAAAACGTCACGCGTTCTCTTAAAGTTCCGGTTTACTTCCTCAACATTACGAGACTCTCCGAGTTCCGGAAAGATGCTCACACTTCGGTTCATACAATCCGACAAGGCAAAATGCTGACGCCGGAGCAACAAGCTGATCCCAACACTTATGCTGATTGTATCCATTGGTGTCTTCCCGGTTTGCCTGACACTTGGAACGAGTTCCTTTACACACGTATTATTTCACGTTCCTGA
Protein:  
MQPWRRKFPLFETGITMKQRKNSNLSIFAVVFSVFLFGIFLYNEDVKSIADFPFSSSKPSNVQESQEEAKPTTEITSLPIQEPVKNSDPAQEPVKKPEPDQDSVRETEPVQEEVSKAEEGKKIELFAVTEEEDDGGDVELPPEECDLFTGEWVFDNETHPLYKEDHCEFLTAQVTCMRNGRRDSLYQNWRWQPRDCSLPKFKAKLLLEKLRNKRMMFVGDSLNRNQWESMVCLVQSVVPPGRKSLNKTGSLSVFRVEDYNATVEFYWAPFLVESNSDDPNMHSILNRIIMPESIEKHGVNWKGVDFLVFNTYIWWMNTFDMKVLRGSFDKGDTEYEEIQRPVAYQRVLRTWGDWVEQNIDPLHTTVFFASMSPLHIKSLDWENPDGIKCALETTPILNMSMPFSVGTDYRLFSVAENVTRSLKVPVYFLNITRLSEFRKDAHTSVHTIRQGKMLTPEQQADPNTYADCIHWCLPGLPDTWNEFLYTRIISRS